I believe the flaw of most research base is lack of agreement and research into fundamental abstract "biologic life concepts" that can be used as a guide to predict concrete research direction.
I have been able to conceptualize neuron network functions in that way - colored by their modulating neurotransmitter, but most other bodily functions can be abstractized like that as well.
Here's an example:
Dopaminergic networks are ALWAYS about relational processing - distance between real state and projected state. In that sense they provide executive guidance to projected states of ALL "integrated/controlled objects" including muscles(alzheimers vividly explains it, muscle movement works by projecting a position and the dopaminergic networks provide autimatic guidance to that position. Dopaminergic networks provide/facilitate guidance/control methods of EVERYTHING, even people, providing for social paranoia, love infatuation etc.
This is not just wishful thinking abstraction. Dopaminergic networks always provide this function because the electrochemical properties of dopaminergic signalling, the electric functions it provides, the frequency of signalling is suitable for such computations. Evolutions reuses it over and over again for the same abstract function each time it evolves something new. Dopaminergic signalling infact provides brain waves.
Serotonergic networks are ALWAYS about "level of integration" processing. They keep a "state" record and tonically regulate "strenth" of associated dopaminergic relational control methods which is a much useful/better way of saying "serotonin inhibits dopamine". Serotonin regulates level of integration with "bad objects" just as it does with "good objects". Integration is provided by dopaminergic methods of control. Level of integration is provided by their success in execution confirming methods of control to work. There are also methods of control that control us. These are methods of control of "bad objects" or in other words, dopaminergic networks provide "control to avoid" the "bad" and thus facilitate a basis for anxiety as well. There's serotonergic receptors that excite rather than inhibit - these handle control methods of bad.
Opioid networks are ALWAYS about modulating immediate sacrifice for a better future level of "well being". Well being "measure" is, as said provided by serotonin as an increase in methods of control/intergration of good objects, an increase in methods of avoidance control of bad object and an increase of methods of control(pleasing) of bad objects that are integrated and also denied to be bad because of failure to avoid(repressed knowledge about the tamer of the horse being infact its abuser, stockholm syndrome etc). Opioidergic signalling provides ability to sacrifice the now for the future by numbing/easing the painful, negative, opposing body stimuli of the now in order to execute and confirm a control method that when confirmed will provide a new level of well being. There is positive - mu opioid - providing the ability to sacrifice the now(emotional now) and generate a rise in motivation to put in effort to learn to control a pleasurable/positive object. Kappa opioid provide the ability to sacrifice the now to generate increasing motivation to learn to control a negative object, or if helplessness has been learned from too much failure, kappa opioids provide means of repressing the knowledge of being integrated with a bad object but still potentiating the required dopaminergic urges to please it(stockholm syndrom, horse taming, whatever learned helplessness denial).
This actually works at the social psyche level, bodily functions level, all levels. Food is processed as objects. The body recognizes good or bad and processes using the same mechanisms as it does social objects. Social objects have an extra piggy back of vasopressin and oxytocin signalling also potentiating dopaminergic relational control urging, but the underlying system is the same. Pathogens are also processed as objects, regulated as threats, fears etc. All these subnetworks have evolved some of their own specialities perhaps and I guess there has to be some wierd exceptions to these abstract concepts, but I have not yet been dissapointed with how these basic concepts predict studies.
I have more, but just to give an example. It can easily be seed - the main abstract biologic functions of life - evolving through time. Control methods integration with the real world providing well being levels. The most basic life forms follow the same paradigm and the paradigm can be tracked through evolution easily.
Evolving such concepts can actually predict systems that we overlooked. It takes a multidimensional approach to get at these basic concepts but I think it can be worth it. You can see how concepts of aging "oozes" from the function of opioids providing sacrifice(aging) mechanisms. It is sacrifice for "life", even for offsrpings, maternal care and sacrifice for the offspring is also a function of opioids(and piggybacking oxytocin. the mammalian urge to take care of offsprings evolved though oxytocin providing a piggyback "wellbeing input" on top of opioidergic signalling if the attached offspring survives). It takes a wider understanding to create these concepts.
Aging is evolutionary and conceptually sacrifice for future life(primary abstract function of opioids). If an animal did not age there would be less genetic changes, less generations and evolution/adaptation of such species would be slower - they would not surive faster aging competition. I can't really understand why this whole line of research fails to see this. It's almost as if people think aging is a glitch, an imperfection in mother nature, cells that can't last long, whatever, as if it could not create us better. While infact it did it on purpose.
An animal that has been beaten by other animals, stressed too much SHOULD die. Gathering too much stress causes premature death. It as an evolutionary function which the individual experiences as punshiment for failure but from the one order up perspective of life this punishment is actually pro-life. The ones that cant cope, die to provide more chance for the ones that can cope to procreate and spread their superior genetic material and control methods. Life is bigger than an individual or a single generation.
A species that is in danger and being overrun by other conditiones experiences more stress, lives shorter, procreates more(stress increases procreation) in order to speed up evolution and make up for the lack of adaptation.
Anyway, lack of perspective and understanding of *life* is driving scientists into dead ends and random experimenting.
Edited by addx, 09 March 2014 - 02:54 PM.